Marine Microbial Eukaryote Transcriptome Project
| Project Statistics | |
|---|---|
| Unique Genera: | 205 |
| Unique Species: | 297 |
| Unique Strains: | 386 |
| Number Approved: | 652 |
Approved Transcriptomes
Taxonomy Classification Explanation More [+]
The "Encyclopedia of Life" (http://www.eol.org) was used to obtain the majority of taxonomical information found in this table. EOL classifications are drawn from various databases, including NCBI, the World Register of Marine Species, and the Integrated Taxonomic Information System (ITIS), of which NCBI was most heavily used. In some instances, classifications were conflicting among the various databases and in such cases NCBI classifications were used. Fields marked as "unknown" indicate that information from NCBI was not available and that information from other databases was either unavailable or unable to be resolved.
The taxonomy information has been edited by: Julia Metzner, Eunsoo Kim, Frederic Mahe, Adriane Jones and John Archibald
| Investigator | High Level Classification | Phylum | Class | Order | Family | Genus | Species | Strain |
Sample Id 
|
Metadata Submitted | Sent bar-coded tubes | RNA Received | cDNA | RNA Passed QC | DSN | RNA-Seq Library Constructed | Illumina Sequencing | Assembly & Annotation | Submitted to CAMERA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
John Archibald
|
Cryptophyta (Hacrobia, Chromalveolata) | Cryptophyta | Cryptophyceae | Cryptomonadales | Cryptomonadaceae | Cryptomonas | sp. | MMETSP1050 |
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1 |
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John Archibald
|
Rhizaria (SAR) | Chlorarachniophyta | Chlorarachniophyceae | Chlorarachniales | Chlorarachniaceae | Bigelowiella | natans | 623 | MMETSP1052 |
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1 |
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John Archibald
|
Unknown | Unknown | Unknown | Unknown | Unknown | Undescribed | undescribed | CCMP 1259 | MMETSP1054 |
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1 |
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John Archibald
|
Unknown | Unknown | Unknown | Unknown | Unknown | Undescribed | Undescribed | CCMP 1258 | MMETSP1055 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemaceae | Cyclotella | meneghiniana | CCMP338 | MMETSP1057 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemaceae | Detonula | confervacea | CCMP353 | MMETSP1058 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemaceae | Thalassiosira | sp. | MMETSP1059 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Pseudo-nitzschia | pungens cf. cingulata | GGA1 | MMETSP1060 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Bacillariophyceae | Bacillariales | Bacillariaceae | Pseudo-nitzschia | pungens cf. pungens | GGC3 | MMETSP1061 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Lithodesmidales | Lithodesmiaceae | Ditylum | brightwellii | Pop1 | MMETSP1062 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Lithodesmidales | Lithodesmiaceae | Ditylum | brightwellii | Pop2 | MMETSP1063 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Aulacoseirales | Aulacoseiraceae | Aulacoseira | subarctica | CCAP 1002/5 | MMETSP1064 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Bacillariophyceae | Naviculales | Amphipleuraceae | Amphiprora | paludosa | CCMP125 | MMETSP1065 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Coscinodiscales | Conscinodiscaceae | Coscinodiscus | wailesii | CCMP2513 | MMETSP1066 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemaceae | Thalassiosira | punctigera | Tpunct2005 | MMETSP1067 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Ochrophyta | Dictyochophyceae | Pedinellales | Pedinellaceae | Pseudopedinella | elastica | CCMP716 | MMETSP1068 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Mediophyceae | Cymatosirales | Cymatosiraceae | Minutocellus | polymorphus | NH13 | MMETSP1070 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemaceae | Thalassiosira | sp. | NH16 | MMETSP1071 |
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1 |
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Susanne Menden-Deuer
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Gonyaulacales | Ceratiaceae | Ceratium | fusus | MMETSP1074 |
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1 |
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Susanne Menden-Deuer
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Gonyaulacales | Ceratiaceae | Ceratium | fusus | MMETSP1075 |
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1 |
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Alexandra Worden
|
Viridiplantae (Archaeplastida) | Chlorophyta | Prasinophyceae | Mamiellales | Mamiellaceae | Micromonas | sp. | CCMP1646 | MMETSP1080 |
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1 |
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Alexandra Worden
|
Pyramimonas | amylifera | CCMP720 | MMETSP1081 |
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1 |
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Alexandra Worden
|
Viridiplantae (Archaeplastida) | Chlorophyta | Prasinophyceae | Mamiellales | Mamiellaceae | Micromonas | sp. | NEPCC29 | MMETSP1082 |
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1 |
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David Caron
|
Haptophyta (Hacrobia, Chromalveolata) | Haptophyta | Prymnesiophyceae | Prymensiales | Prymenesiaceae | Prymnesium | parvum | Texoma1 | MMETSP1083 |
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1 |
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Alexandra Worden
|
Micromonas | sp. | RCC472 | MMETSP1084 |
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1 |
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