Marine Microbial Eukaryote Transcriptome Project
| Project Statistics | |
|---|---|
| Unique Genera: | 203 |
| Unique Species: | 297 |
| Unique Strains: | 383 |
| Number Approved: | 651 |
Approved Transcriptomes
Taxonomy Classification Explanation More [+]
The "Encyclopedia of Life" (http://www.eol.org) was used to obtain the majority of taxonomical information found in this table. EOL classifications are drawn from various databases, including NCBI, the World Register of Marine Species, and the Integrated Taxonomic Information System (ITIS), of which NCBI was most heavily used. In some instances, classifications were conflicting among the various databases and in such cases NCBI classifications were used. Fields marked as "unknown" indicate that information from NCBI was not available and that information from other databases was either unavailable or unable to be resolved.
The taxonomy information has been edited by: Julia Metzner, Eunsoo Kim, Frederic Mahe, Adriane Jones and John Archibald
| Investigator | High Level Classification | Phylum | Class | Order | Family | Genus | Species | Strain |
Sample Id 
|
Metadata Submitted | Sent bar-coded tubes | RNA Received | cDNA | RNA Passed QC | DSN | RNA-Seq Library Constructed | Illumina Sequencing | Assembly & Annotation | Submitted to CAMERA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
David Caron
|
Stramenopila (SAR, Chromalveolata) | Ochrophyta | Synurophyceae | Ochromonadales | Dinobryaceae | Dinobryon | sp. | UTEXLB2267 | MMETSP0812 |
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1 |
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David Caron
|
Euglenozoa (Excavata) | Euglenozoa | Euglenida | Eutreptiales | Eutreptiaceae | Eutreptiella | cf. gymnastica | CCMP1594 | MMETSP0811_2 |
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1 |
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David Caron
|
Euglenozoa (Excavata) | Euglenozoa | Euglenida | Eutreptiales | Eutreptiaceae | Eutreptiella | cf. gymnastica | CCMP1594 | MMETSP0810 |
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1 |
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David Caron
|
Euglenozoa (Excavata) | Euglenozoa | Euglenida | Eutreptiales | Eutreptiaceae | Eutreptiella | cf. gymnastica | CCMP1594 | MMETSP0809 |
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1 |
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Alexandra Worden
|
Viridiplantae (Archaeplastida) | Chlorophyta | Unknown | Unknown | Unknown | Picocystis | salinarum | CCMP1897 | MMETSP0807_2 |
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1 |
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Alexandra Worden
|
Viridiplantae (Archaeplastida) | Chlorophyta | Prasinophyceae | Pseudoscourfieldiales | Pyncnococcaceae | Prasinoderma | coloniale | CCMP1413 | MMETSP0806_2 |
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1 |
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Alexandra Worden
|
Viridiplantae (Archaeplastida) | Chlorophyta | Prasinophyceae | Chlorodendrales | Chlorodendraceae | Tetraselmis | astigmatica | CCMP880 | MMETSP0804 |
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1 |
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Alexandra Worden
|
Viridiplantae (Archaeplastida) | Chlorophyta | Prasinophyceae | Mamiellales | Unknown | Crustomastix | stigmata | CCMP3273 | MMETSP0803_2 |
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1 |
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Alexandra Worden
|
Viridiplantae (Archaeplastida) | Chlorophyta | Prasinophyceae | Mamiellales | Mamiellaceae | Micromonas | sp. | CCMP2099 | MMETSP0802 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Bacillariophyceae | Striatellales | Striatellaceae | Striatella | unipunctata | CCMP 2910 | MMETSP0800 |
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1 |
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Jeremiah Hackett
|
Cryptophyta (Hacrobia, Chromalveolata) | Cryptophyta | Cryptophyceae | Pyrenomonadales | Geminigeracea | Geminigera | cryophila | CCMP2564 | MMETSP0799 |
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1 |
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Jeremiah Hackett
|
Alveolata (SAR, Chromalveolata) | Ciliophora | Litostomatea | Cyclotrichiida | Mesodiniidae | Myrionecta | rubra | CCMP2563 | MMETSP0798 |
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1 |
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Jeremiah Hackett
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Dinophysiales | Dinophysiaceae | Dinophysis | acuminata | DAEP01 | MMETSP0797 |
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1 |
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Jeremiah Hackett
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Gonyualacales | Gonyaulacaceae | Pyrodinium | bahamense | MMETSP0796 |
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1 |
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Jeremiah Hackett
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Gonyualacales | Goniodomaceae | Gambierdiscus | sp. var. ribotype II | CCMP1655 | MMETSP0795 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Meloseirales | Stephanopyxidacea | Stephanopyxis | turris | CCMP 815 | MMETSP0794_2 |
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1 |
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Jeremiah Hackett
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Gonyualacales | Goniodomataceae | Alexandrium | catenella | OF101 | MMETSP0790 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Rhizosoleniales | Rhizosoleniaceae | Rhizosolenia | setigera | RCC 842 | MMETSP0789 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Fragilariophyceae | Thalassionematales | Thalassionemataceae | Thalassionema | frauenfeldii | CCMP 1798 | MMETSP0786 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Ochrophyta | Bolidophyceae | Bolidomonodales | Bolidomonoadaceae | Bolidomonas | pacifica | CCMP 1866 | MMETSP0785 |
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1 |
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Jeremiah Hackett
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Gymnodiniales | Gymnodiniaceae | Gymnodinium | catenatum | GC744 | MMETSP0784 |
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1 |
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John Archibald
|
Unknown | Unknown | Unknown | Unknown | Unknown | Palpitomonas | bilix | NIES-2562 | MMETSP0780_2 |
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1 |
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Shauna Murray
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Gonyualacales | Goniodomaceae | Gambierdiscus | australes | CAWD149 | MMETSP0766_2 |
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1 |
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alastair simpson
|
Heterolobosea (Excavata) | Unknown | Unknown | Unknown | Unknown | Percolomonas | cosmopolitus | WS | MMETSP0759 |
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1 |
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alastair simpson
|
Heterolobosea (Excavata) | Unknown | Unknown | Unknown | Unknown | Percolomonas | cosmopolitus | MMETSP0758 |
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1 |
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