Marine Microbial Eukaryote Transcriptome Project
| Project Statistics | |
|---|---|
| Unique Genera: | 205 |
| Unique Species: | 297 |
| Unique Strains: | 386 |
| Number Approved: | 652 |
Approved Transcriptomes
Taxonomy Classification Explanation More [+]
The "Encyclopedia of Life" (http://www.eol.org) was used to obtain the majority of taxonomical information found in this table. EOL classifications are drawn from various databases, including NCBI, the World Register of Marine Species, and the Integrated Taxonomic Information System (ITIS), of which NCBI was most heavily used. In some instances, classifications were conflicting among the various databases and in such cases NCBI classifications were used. Fields marked as "unknown" indicate that information from NCBI was not available and that information from other databases was either unavailable or unable to be resolved.
The taxonomy information has been edited by: Julia Metzner, Eunsoo Kim, Frederic Mahe, Adriane Jones and John Archibald
| Investigator | High Level Classification | Phylum | Class | Order | Family | Genus | Species |
Strain 
|
Sample Id | Metadata Submitted | Sent bar-coded tubes | RNA Received | cDNA | RNA Passed QC | DSN | RNA-Seq Library Constructed | Illumina Sequencing | Assembly & Annotation | Submitted to CAMERA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Patrick Keeling
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Peridiniales | Gonyaulacaceae | Protoceratium | reticulatum | CCCM 535 (=CCMP 1889) | MMETSP0228 |
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1 |
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Patrick Keeling
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Pyrocystales | Pyrocystaceae | Pyrocystis | lunula | CCCM 517 | MMETSP0229_2 |
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1 |
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John Archibald
|
Cryptophyta (Hacrobia, Chromalveolata) | Cryptophyta | Cryptophyceae | Cryptomonodales | Cryptomonadaceae | Cryptomonas | paramecium | CCAP977/2a | MMETSP0038_2 |
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1 |
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Thomas Mock
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemaceae | Thalassiosira | antarctica | CCAP1085/9 | MMETSP0902 |
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1 |
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Thomas Mock
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemaceae | Thalassiosira | antarctica | CCAP1085/9 | MMETSP0903 |
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1 |
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Thomas Mock
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemaceae | Thalassiosira | antarctica | CCAP1085/9 | MMETSP0904 |
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1 |
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Thomas Mock
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Thalassiosirales | Skeletonemaceae | Thalassiosira | antarctica | CCAP1085/9 | MMETSP0905 |
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1 |
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Thomas Mock
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Rhizosoleniales | Rhizosoleniaceae | Proboscia | inermis | CCAP1064/1 | MMETSP0816 |
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1 |
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David Caron
|
Spumella | elongata | CCAP 955/1 | MMETSP1098 |
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1 |
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David Caron
|
Paraphysomonas | vestita | CCAP 935/14 | MMETSP1107 |
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1 |
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David Caron
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Neobodo | designis | CCAP 1951/1 | MMETSP1114 |
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1 |
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Behzad Imanian
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Peridiniales | Peridiniaceae | Glenodinium | foliaceum | CCAP 1116/3 | MMETSP0118_2 |
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1 |
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Behzad Imanian
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Peridiniales | Peridiniaceae | Glenodinium | foliaceum | CCAP 1116/3 | MMETSP0119_2 |
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1 |
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Ginger Armbrust
|
Stramenopila (SAR, Chromalveolata) | Bacillariophyta | Coscinodiscophyceae | Aulacoseirales | Aulacoseiraceae | Aulacoseira | subarctica | CCAP 1002/5 | MMETSP1064 |
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1 |
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Alexandra Worden
|
Micromonas | pusilla | CCAC1681 | MMETSP1401 |
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1 |
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Shauna Murray
|
Alveolata (SAR, Chromalveolata) | Dinophyta | Dinophyceae | Gonyualacales | Goniodomaceae | Gambierdiscus | australes | CAWD149 | MMETSP0766_2 |
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1 |
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Hollie Putnam
|
Symbiodinium | sp. | C15 | MMETSP1370 |
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1 | ||||||||||
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Hollie Putnam
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Symbiodinium | sp. | C15 | MMETSP1371 |
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1 | ||||||||||
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Denis Lynn
|
Pseudokeronopsis | Pseudokeronopsis sp. | Brazil | MMETSP1396 |
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1 |
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David Caron
|
Alveolata (SAR, Chromalveolata) | Ciliophora | Oligohymenophorea | Philasterida | Uronematidae | Uronema | sp. | Bbcil | MMETSP0018_2 |
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1 |
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David Caron
|
Ochromonas | sp. | BG-1 | MMETSP1105 |
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1 |
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Gwenael Piganeau
|
Viridiplantae (Archaeplastida) | Chlorophyta | Prasinophyceae | Mamiellales | Mamiellaceae | Ostreococcus | O. clade D spp | BCC99000 | MMETSP0933 |
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1 |
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Gwenael Piganeau
|
Viridiplantae (Archaeplastida) | Chlorophyta | Prasinophyceae | Mamiellales | Mamiellaceae | Ostreococcus | O. clade D spp | BCC98000 | MMETSP0932 |
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1 |
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Gwenael Piganeau
|
Viridiplantae (Archaeplastida) | Chlorophyta | Prasinophyceae | Mamiellales | Mamiellaceae | Ostreococcus | O. clade D spp | BCC35000 | MMETSP0929 |
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1 |
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Gwenael Piganeau
|
Viridiplantae (Archaeplastida) | Chlorophyta | Prasinophyceae | Mamiellales | Mamiellaceae | Ostreococcus | O. clade D spp | BCC26000 | MMETSP0928 |
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1 |
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